Pokhara University has four schools:
School of Health and Allied Sciences, School of Engineering, School of Development and Social Engineering and School of Business in its academic complex.
School of Health and Allied Sciences has run Bachelor in Pharmacy, Medical Laboratory Technology, Public Health and Nursing. It is planning to launch new programs such as Master of Pharmacy, Master of Public Health, and Master of Medical Laboratory Technology.
School of Business is running Bachelor in Business Administration, Bachelor in Business Administration in Banking and Insurance, and Master in Business Administration. It is planning to launch new programs MBA Finance and MBA Global Business.
At present, School of Development and Social Engineering is running Master in Population, Gender and Development and going to launch Bachelor of Arts in Development Studies.